CV & Publication List Z. Trajanoski - lipotox

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CV Z. Trajanoski. Curriculum Vitae. Univ.-Prof. Dipl. ... Merkel O, Heyder C, Asslaber D, Hamacher F, Holler C, Stöcher M, Scheideler M, Paar C, Prokesch A, .

CV Z. Trajanoski

Curriculum Vitae Univ.-Prof. Dipl.-Ing. Dr. techn. Zlatko Trajanoski Institute for Genomics and Bioinformatics, Graz University of Technology, Petersgasse 14/V, A-8010 Graz; phone: +43-316-873-5332, fax: +43-316-873-5340, e-mail: [email protected]

Personal data Date of Birth Place of Birth Nationality

February 2, 1964 Skopje, Macedonia Austria

University education 1984-1990 Graduate study of Biomedical Engineering, Graz University of Technology, Austria 1991-1995 Ph.D. study, Graz University of Technology, Austria Doctorate in Biomedical Engineering, with the highest honors 1999 Habilitation (venia docendi) for Associate Professor of Biomedical Engineering, Graz University of Technology, Austria Career history since 2004 Head of the Institute for Genomics and Bioinformatics, Graz University of Technology, Austria since 2003 Full Professor for Bioinformatics, Graz University of Technology, Austria since 2002 Head, Christian-Doppler-Laboratory for Genomics and Bioinformatics, Graz University of Technology, Austria 1999- 2003 Associate Professor, Institute of Biomedical Engineering, Graz University of Technology, Austria 1997-1998 Postdoctoral fellow, Howard Hughes Medical Institute and Department of Internal Medicine, Yale University, New Haven, CT, USA 1994-1999 Assistant Professor, Institute of Biomedical Engineering, Graz University of Technology, Austria 1991-1994 Research Associate, Institute of Biomedical Engineering, Graz University of Technology, Austria Career related activities and memberships 2000-2001 Sabbatical Year, National Institutes of Health, Bethesda, MD, USA 2000 Visiting Faculty, The Institute for Genomic Research (TIGR), Rockville, MD, USA (three months) Honors and awards 1997 Max-Kade Award 1997-1998 Austrian Academy of Sciences and Max-Kade Foundation Inc., New York, NY, USA: fellowship 1997 Stefan-Schuy-Prize, Austrian Society for Biomedical Engineering Research interests computational genomics, microarrays, adipogenesis, nuclear receptors

CV Z. Trajanoski

Selected publications (present - 2003) 1.

Elabd C, Basillais A, Beaupied H, Breuil V, Wagner N, Scheideler M, Zaragosi LE, Massiera F, Lemichez E, Trajanoski Z, Carle GF, Euller-Ziegler L, Ailhaud G, Benhamou CL, Dani C, Amri EZ. Oxytocin modulates psteoblast/adipocyte balance. Stem Cells, in press.

2.

Merkel O, Heyder C, Asslaber D, Hamacher F, Holler C, Stöcher M, Scheideler M, Paar C, Prokesch A, Trajanoski Z, Tinhofer I, Greil R. Arsenic trioxide induces apoptosis preferentially in B-CLL cells of patients with unfavourable prognostic factors including del17p13. J Mol Med, in press [Epub ahead of print: 23 Feb 2008].

3.

Scheideler M, Elabd C, Zaragosi, LE, Chiellini C, Yadav S, Duszka K, Hackl H, Sanchez-Cabo F, Friedl G, Papak C, Prokesch A, Windhager R, Ailhaud G, Dani C, Amri EZ, Trajanoski Z. Comparative transciptomics of human multipotent stem cells during adipogenesis and osteoblastogenesis. BMC Genomics, 9:340.

4.

Pinent M, Hackl H, Burkard TR, Prokesch A, Scheideler M, Paar C, Hämmerle G, Zechner R, Trajanoski Z, Strauss JG. 2008. Differential transcriptional modulation of biological processes in adipocyte triglyceride lipase and hormone-sensitive lipase deficient mice. Genomics, 92:26-32.

5.

Müller WG, Rieder D, Karpova TS, John S, Trajanoski Z, McNally JG. 2007. Organization of chromatin and histone modifications at a transcription site. J Cell Biol, 177:957-67.

6.

Hartler J, Thallinger GG, Stocker G, Sturn A, Burkard TR, Körner E, Rader R, Schmidt A, Mechtler K, Trajanoski Z. 2007. MASPECTRAS: a platform for management and analysis of proteomics LC-MS/MS data. BMC Bioinformatics, 8:197.

7.

Kulterer B, Friedl G, Jandrositz A, Sanchez-Cabo F, Prokesch A, Paar C, Scheideler M, Windhager R, Preisegger KH, Trajanoski Z. 2007. Gene expression profiling of human mesenchymal stem cells derived from bone marrow during expansion and osteoblast differentiation. BMC Genomics, 8:70.

8.

Tschernatsch MMO, Mlecnik B, Trajanoski Z, Zechner R, Zimmermann R. 2006. LPL-mediated lipolysis of VLDL induces an upregulation of AU-rich mRNAs and an activation of HuR in endothelial cells. Atherosclerosis, 189:310-317.

9.

Rainer J, Sanchez-Cabo F, Stocker G, Sturn A, Trajanoski Z. 2006. CARMAweb: comprehensive R- and BioConductor-based web service for microarray data analysis. Nucleic Acids Res, 1:34(Web Server issue):W498-503

10. Hackl H, Burkard T, Sturn A, Fiedler R, Gaspard, R, Schleiffer A, Tian S., Quackenbush J., Eisenhaber F., and Trajanoski Z. 2005. Molecular processes during fat cell development revealed by gene expression profiling and functional annotation. Genome Biol, 6:R108. 11. Pagès F, Camus M, Berger A, Sanchez-Cabo F, Costes A, Molidor R, Kirilovsky A, Nilsson M, Damotte D, Bruneval P, Cugnenc P-H, Trajanoski Z, Fridman W.-F, and Galon J. 2005. Control of early-metastatic invasion by effector-memory T-cells predicts increased survival of colorectal cancer. N. Engl. J. Med, 353:2654-2666. 12. DiCamillo B, Sanchez-Cabo F, Toffolo G, Nair SK, Trajanoski Z, and Cobelli C. 2005. Identification of gene regulatory modules using entropy and mutual information. BMC Bioinformatics, 6 Suppl 4: S11. 13. Vogl C, Sanchez-Cabo F, Stocker G, Hubbard S, Wolkenhauer O, and Trajanoski Z. 2005. A fully Bayesian model to cluster gene expression profiles. Bioinformatics, 21 Suppl 2:ii130-ii136. 14. Bernroider, E., Brehm, A., Krssak, M., Anderwald, C., Trajanoski, Z., Cline, G., Shulman, G., and Roden, M. 2005. The role of intramyocellular lipids during hypoglycemia in patients with intensively treated Type 1 diabetes. J. Clin. Endo. Metab, 90:5559-5565. 15. Pinent M, Bladé MC, Salvadó MC, Arola L, Hackl H, Quackenbush J, Trajanoski Z, and Ardévol A. 2005. Grape-seed derived procyanidins interfere with adipogenesis of 3T3-L1 cells at the onset of differentiation. Int. J. Obesity, 29:934-941. 16. Mlecnik B, Scheideler M, Hackl H, Hartler J, and Trajanoski Z. 2005. PathwayExplorer: web service for visualizing high-throughput expression data on biological pathways. Nucleic Acids Res, 33:W633-W637. 17. Maurer M, Molidor R, Sturn A, Hartler J, Hackl H, Stocker G, Prokesch A, Scheideler M, and Trajanoski Z. 2005. MARS: Microarray analysis, retrieval, and storage system. BMC Bioinformatics, 6:101. 18. Yu JS, Ongarello S, Fiedler R, Chen XW, Toffolo G, Cobelli C, and Trajanoski Z. 2005. Ovarian cancer identification based on dimensionality reduction for high-throughput mass spectrometry data. Bioinformatics, 15;21(10):2200-2209. 19. Hackl H, Maurer M, Mlecnik B, Hartler J, Stocker G, Miranda-Saavedra D, and Trajanoski Z. 2004. GOLD.db: Genomics of lipid-associated disorders database. BMC Genomics, 5:93.