PLOS SUPP TABLE 6

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0.823. TAL2. T-cell acute lymphocytic leukemia 2. POU4F2. 5458. 0.731. 0.011. 0.86. 0.133. 0.648. 0.301. POU4F2. POU domain, class 4, transcription factor 2.
Supplemental Table S6

Gene ID Entrez TIMELESS 8914 BAPX1 579 FLJ10697 55205 ELF3 1999 ZFY 7544 ZNF90 7643 ZNF287 57336 BRD7 29117 RNF22 10612 LOC57209 57209 MTA1L1 9219 DFKZP434E026 112398 HOXC10 3226 HSAJ2425 55566 LHX6 26468 ZNF226 7769 TAF2D 6877 ZNF200 7752 TRIP6 7205 DKFZp547H236 56917 HMX1 3166 ISGF3G 10379 ZFHX1B 9839 NR0B2 8431 NFATC1 4772 ZNF217 7764 PER2 8864 NSEP1 4904 HOXB5 3215 ZNF137 7696 TBR1 10716 ZNF214 7761 SLB 26160 ZNF215 7762 HOXC9 3225 ZNF234 10780 ZNF295 49854 CEBPB 1051 FLJ20729 54680 SCML2 10389 ZNF135 7694 NR5A2 2494 ZNF208 7757 MADH9 4093 DR1 1810 HSA275986 55802 ZNF6 7552

O hr Fold change P-value 1.3 0.034 1.446 0.009 1.373 0.029 1.233 2.28E-04 1.272 0.013 1.21 0.006 1.245 0.012 1.221 0.01 1.204 0.02 0.868 0.493 1.177 0.218 1.294 0.1 0.98 0.629 1.203 0.164 1.076 0.248 1.123 0.064 0.929 0.347 1.003 0.943 0.955 0.281 1.078 0.166 1.027 0.486 1.051 0.208 0.903 0.022 0.995 0.839 0.992 0.873 0.962 0.214 1.093 0.123 1.108 0.08 1.018 0.665 1.049 0.334 1.05 0.499 1.001 0.977 1.054 0.226 0.905 0.011 1.021 0.373 1.005 0.801 1.024 0.405 0.988 0.821 0.953 0.453 1.106 0.063 1.003 0.936 1.04 0.449 1.03 0.501 1.182 0.244 0.995 0.821 1.145 0.008 1.089 0.58

24 hr Fold Change 1.378 1.426 1.141 1.128 1.127 1.042 1.002 0.98 0.954 1.412 1.218 1.758 1.273 1.52 1.548 1.263 1.245 1.383 1.608 1.635 1.25 1.294 1.23 1.694 1.427 1.214 1.205 1.182 1.177 1.175 1.174 1.169 1.168 1.164 1.159 1.151 1.148 1.146 1.137 1.137 1.122 1.12 1.114 1.112 1.109 1.108 1.106

P-value 0.006 0.103 0.021 0.272 0.152 0.305 0.958 0.566 0.09 0.002 0.002 0.011 0.016 0.017 0.026 0.028 0.043 0.05 0.062 0.064 0.066 0.083 0.083 0.092 0.1 0.111 0.131 0.006 0.144 0.153 0.052 0.049 0.203 0.368 0.046 0.005 0.217 0.234 0.046 0.316 0.152 0.08 0.023 0.058 0.044 0.109 0.426

48 hr Fold Change 1.358 2.122 1.219 1.25 1.396 1.244 1.295 1.374 1.226 1.385 1.281 1.352 1.492 1.444 1.278 1.616 1.492 1.47 1.617 1.272 1.258 1.234 1.344 1.253 1.662 1.387 1.247 1.56 1.357 1.401 1.339 1.576 1.284 1.613 1.293 1.244 1.446 1.277 1.333 1.309 1.608 1.242 1.361 1.256 1.242 1.215 1.706

P-value 0.047 0.005 0.018 0.004 0.001 0.025 0.016 0.005 0.001 0.018 0.009 0.021 0.013 0.024 0.021 0.022 0.048 0.045 0.034 0.001 0.019 0.037 0.034 0.031 0.004 0.027 0.02 0.001 0.01 0.049 0.05 0.029 0.016 0.034 0.031 0.026 0.043 0.043 0.009 0.04 0.011 0.05 0.052 0.047 0.033 0.016 0.003

Updated symbol Updated description TIMELESS timeless homolog (Drosophila) BAPX1 Bagpipe homeobox homolog 1 (Drosophila) ZNF532 Zinc finger protein 532 ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) ZFY Zinc finger protein, Y-linked ZNF90 zinc finger protein 90 ZNF287 zinc finger protein 287 BRD7 Bromodomain containing 7 TRIM3 Tripartite motif-containing 3 ZNF248 Zinc finger protein 248 MTA2 Metastasis associated 1 family, member 2 EGLN2 egl nine homolog 2 (C. elegans) HOXC10 homeobox C10 HSAJ2425 p65 protein LHX6 LIM homeobox 6 ZNF226 zinc finger protein 226 TAF5 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa ZNF200 zinc finger protein 200 TRIP6 thyroid hormone receptor interactor 6 MEIS3 Meis1, myeloid ecotropic viral integration site 1 homolog 3 (mouse) HMX1 Homeobox (H6 family) 1 ISGF3G interferon-stimulated transcription factor 3, gamma 48kDa ZFHX1B Zinc finger homeobox 1b NR0B2 nuclear receptor subfamily 0, group B, member 2 NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 ZNF217 zinc finger protein 217 PER2 Period homolog 2 (Drosophila) YBX1 Y box binding protein 1 HOXB5 homeobox B5 ZNF137 zinc finger protein 137 TBR1 T-box, brain, 1 ZNF214 Zinc finger protein 214 IFT172 Intraflagellar transport 172 homolog (Chlamydomonas) /// selective LIM binding factor homol ZNF215 zinc finger protein 215 HOXC9 homeobox C9 ZNF234 zinc finger protein 234 ZNF295 Zinc finger protein 295 CEBPB CCAAT/enhancer binding protein (C/EBP), beta C1orf181 chromosome 1 open reading frame 181 SCML2 sex comb on midleg-like 2 (Drosophila) ZNF135 Zinc finger protein 135 NR5A2 nuclear receptor subfamily 5, group A, member 2 ZNF208 zinc finger protein 208 SMAD9 SMAD, mothers against DPP homolog 9 (Drosophila) DR1 down-regulator of transcription 1, TBP-binding (negative cofactor 2) DCP1A DCP1 decapping enzyme homolog A (S. cerevisiae) ZNF711 Zinc finger protein 711

ZNF136 ZNF184 RFP2 ZNF175 ZNF79 TBX15 ZNF3 ZNF282 BLZF1 ZNF262 PRDM9 FUBP1 DLX1 ILF3 ZNF177 TZFP POU3F2 ZNF272 FOXD1 ZNF304 ZNF263 EPLIN PROP1 YAF2 HLF ZNF148 TBX3 LMO2 ZNF180 TMF1 EYA1 HOXB9 PBX1 PKNOX1 TAF1C ZNF123 ZNF140 HOXA10 TCF12 WHN ZNF271 NR4A3 ZNF213 TRIM22 TNRC4 KIAA0535 TCF8 FLJ23309 EGR2 ZNF265 ZNF8

7695 7738 10206 7728 7633 6913 7551 8427 8548 9202 56979 8880 1745 3609 7730 27033 5454 10794 2297 57343 10127 51474 5626 10138 3131 7707 6926 4005 7733 7110 2138 3219 5087 5316 9013 7677 7699 3206 6938 8456 10778 8013 7760 10346 11189 9705 6935 79956 1959 9406 7554

1.001 0.912 1.008 0.946 1.251 1.115 0.968 1.055 1.124 0.885 1.09 0.989 0.974 0.919 0.924 1.083 0.945 1.033 1.086 1.156 0.937 1.123 0.991 1.038 1.399 0.998 1.052 0.901 1.024 0.956 1.035 0.934 1.056 1.079 1.044 0.986 1.019 0.988 0.89 0.979 1.014 1.159 0.945 1.035 1.104 0.975 0.804 1.163 0.981 0.883 0.983

0.988 0.323 0.776 0.568 0.077 0.071 0.345 0.157 0.162 0.045 0.279 0.7 0.326 0.742 0.253 0.26 0.469 0.315 0.124 0.086 0.152 0.015 0.782 0.547 0.229 0.959 0.727 0.143 0.372 0.231 0.296 0.142 0.178 0.105 0.39 0.738 0.701 0.786 0.223 0.512 0.632 0.089 0.224 0.64 0.079 0.364 0.064 0.157 0.492 0.214 0.319

1.105 1.101 1.094 1.091 1.088 1.088 1.085 1.078 1.075 1.07 1.069 1.068 1.066 1.065 1.064 1.062 1.062 1.059 1.056 1.051 1.049 1.047 1.047 1.046 1.046 1.044 1.044 1.038 1.034 1.033 1.033 1.031 1.027 1.026 1.025 1.024 1.023 1.021 1.021 1.017 1.014 1.012 1.011 1.009 1.007 1.001 1 0.997 0.995 0.995 0.989

0.548 0.247 0.099 0.155 0.064 0.198 0.207 0.151 0.157 0.571 0.237 0.227 0.271 0.34 0.333 0.324 0.452 0.225 0.134 0.376 0.449 0.31 0.352 0.452 0.399 0.699 0.251 0.339 0.51 0.454 0.435 0.306 0.617 0.705 0.655 0.479 0.68 0.712 0.491 0.716 0.712 0.83 0.813 0.854 0.884 0.979 0.998 0.934 0.937 0.882 0.79

1.316 1.666 1.371 1.581 1.313 1.218 1.503 1.328 1.374 1.342 1.249 1.408 1.258 1.328 1.811 1.61 1.441 1.355 1.221 1.226 1.376 1.316 1.271 1.476 1.29 1.638 1.275 1.298 1.366 1.455 1.322 1.208 1.257 1.424 1.26 1.481 1.657 1.263 1.229 1.551 1.269 1.806 1.382 1.234 1.277 1.21 1.279 1.302 1.479 1.24 1.434

0.038 0.036 0.001 0.04 0.039 0.004 0.019 0.007 0.034 0.02 0.002 0.03 0.036 0.007 0.045 0.044 0.008 0.003 0.028 0.035 0.032 0.039 0.054 0.033 0.049 0.044 0.013 0.038 0.007 0.023 0.004 0.033 0.003 0.007 0.038 0.014 0.004 0.047 0.019 0.002 0.021 0.006 0.032 0.021 1.47E-04 0.048 0.031 0.023 0.045 0.014 0.039

ZNF136 ZNF184 RFP2 ZNF175 ZNF79 TBX15 ZNF3 ZNF282 BLZF1 ZMYM4 PRDM9 FUBP1 DLX1 ILF3 ZNF177 ZBTB32 POU3F2 ZNF272 FOXD1 ZNF304 ZNF263 LIMA1 PROP1 YAF2 HLF ZNF148 TBX3 LMO2 ZNF180 TMF1 EYA1 HOXB9 PBX1 PKNOX1 TAF1C ZNF123 ZNF140 HOXA10 TCF12 FOXN1 ZNF271 NR4A3 ZNF213 TRIM22 TNRC4 ST18 TCF8 KIAA1815 EGR2 ZRANB2 ZNF8

zinc finger protein 136 zinc finger protein 184 ret finger protein 2 zinc finger protein 175 zinc finger protein 79 T-box 15 zinc finger protein 3 zinc finger protein 282 Basic leucine zipper nuclear factor 1 (JEM-1) zinc finger, MYM-type 4 PR domain containing 9 far upstream element (FUSE) binding protein 1 distal-less homeobox 1 interleukin enhancer binding factor 3, 90kDa zinc finger protein 177 zinc finger and BTB domain containing 32 POU domain, class 3, transcription factor 2 Zinc finger protein 272 forkhead box D1 zinc finger protein 304 zinc finger protein 263 LIM domain and actin binding 1 prophet of Pit1, paired-like homeodomain transcription factor YY1 associated factor 2 hepatic leukemia factor zinc finger protein 148 T-box 3 (ulnar mammary syndrome) LIM domain only 2 (rhombotin-like 1) zinc finger protein 180 TATA element modulatory factor 1 eyes absent homolog 1 (Drosophila) homeobox B9 Pre-B-cell leukemia transcription factor 1 PBX/knotted 1 homeobox 1 TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa zinc finger protein 123 zinc finger protein 140 homeobox A10 transcription factor 12 (HTF4, helix-loop-helix transcription factors 4) Forkhead box N1 zinc finger protein 271 nuclear receptor subfamily 4, group A, member 3 zinc finger protein 213 tripartite motif-containing 22 trinucleotide repeat containing 4 suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein) transcription factor 8 (represses interleukin 2 expression) KIAA1815 early growth response 2 (Krox-20 homolog, Drosophila) zinc finger, RAN-binding domain containing 2 zinc finger protein 8

EN1 LOC51045 ARNTL LOC51043 ZNF146 TBX5 NR2F2 AIB3 ZNF192 ZNF33A MLLT2 YY1 ZNF154 ZNF24 KIAA1442 PBX3 BCL11A RNF10 ZNF219 ZNF256 MGC16733 LMX1B CREG MYT1L ZNF277 ZNFN1A3 ZNF84 RARG ZFP103 TRAP150 ZNF237 TNRC6 NFIC LDB2 RUNX2 TRIP11 HSGT1 ZFX NMI RORA ZNF144 SRA1 ZFP161 ZFP106 ZNF361 PCAR PC4 ZNF258 ZF5128 ZNF225 NR2F1

2019 51045 406 51043 7705 6910 7026 497657 7745 7581 4299 7528 7710 7572 57593 5090 53335 9921 51222 10172 92105 4010 8804 23040 11179 22806 7637 5916 7844 9967 9205 27327 4782 9079 860 9321 11319 7543 9111 6095 7703 10011 7541 64397 55422 AF174394 3475 9204 25799 7768 7025

1.053 0.992 1.002 0.978 1.03 1.158 1.053 1.063 0.891 0.969 1.21 0.866 1.017 0.883 1.016 1.001 1.136 1.154 0.968 0.971 0.932 0.899 1.138 0.997 1.04 0.993 0.89 0.948 0.959 0.997 1.014 1.168 1.123 0.966 1.049 1.018 1.029 1.091 1.067 0.991 1.131 1.422 1.007 1.055 0.994 1.059 1.081 1.018 0.921 1.014 1.067

0.435 0.766 0.946 0.638 0.393 0.056 0.267 0.109 0.014 0.637 0.101 0.009 0.655 0.11 0.654 0.979 0.172 0.05 0.436 0.526 0.33 0.514 0.106 0.968 0.312 0.845 0.091 0.465 0.363 0.918 0.687 0.02 0.019 0.496 0.284 0.653 0.615 0.125 0.119 0.832 0.048 0.134 0.85 0.307 0.864 0.171 0.552 0.674 0.861 0.734 0.248

0.986 0.982 0.98 0.978 0.978 0.976 0.975 0.973 0.97 0.97 0.97 0.968 0.961 0.959 0.954 0.953 0.952 0.951 0.945 0.942 0.939 0.937 0.934 0.934 0.933 0.932 0.932 0.931 0.93 0.929 0.92 0.917 0.917 0.911 0.911 0.906 0.904 0.895 0.894 0.894 0.889 0.886 0.881 0.878 0.876 0.876 0.875 0.874 0.873 0.873 0.869

0.757 0.617 0.457 0.485 0.504 0.756 0.802 0.49 0.606 0.453 0.671 0.625 0.466 0.481 0.437 0.189 0.364 0.28 0.343 0.36 0.151 0.251 0.086 0.218 0.181 0.323 0.307 0.254 0.339 0.26 0.016 0.039 0.258 0.003 0.106 0.152 0.022 0.062 0.017 0.141 0.212 4.29E-05 0.275 0.044 0.035 0.018 0.344 0.814 0.005 0.519 0.48

1.438 1.201 1.219 1.247 1.222 1.252 1.635 1.214 1.575 1.425 1.316 1.603 1.305 1.312 1.341 1.434 1.437 1.261 1.728 1.375 1.217 1.313 1.252 1.213 1.392 1.316 1.28 1.308 1.234 1.219 1.256 1.257 1.236 1.262 1.217 1.25 1.232 1.251 1.272 1.255 1.214 1.333 1.491 1.55 1.374 1.28 1.356 1.527 1.499 1.648 1.398

0.016 0.005 0.003 0.005 0.017 0.005 0.001 0.031 0.044 0.028 0.019 0.013 0.042 0.032 0.004 0.001 0.009 0.005 0.004 0.033 0.019 0.017 0.039 0.044 0.007 0.047 0.046 0.013 0.031 0.004 0.014 0.008 0.035 0.029 0.012 0.011 0.002 0.038 0.003 0.014 0.045 0.002 0.011 0.032 0.006 0.018 0.017 0.026 0.018 0.026 0.001

EN1 engrailed homolog 1 LOC51045 Discontinued ARNTL aryl hydrocarbon receptor nuclear translocator-like ZBTB7B zinc finger and BTB domain containing 7B ZNF146 zinc finger protein 146 TBX5 T-box 5 NR2F2 nuclear receptor subfamily 2, group F, member 2 ANIB3 aneurysm, intracranial berry 3 ZNF192 zinc finger protein 192 ZNF33A zinc finger protein 33A AFF1 AF4/FMR2 family, member 1 YY1 YY1 transcription factor ZNF154 zinc finger protein 154 ZNF24 zinc finger protein 24 RP5-860F19.3 KIAA1442 protein PBX3 pre-B-cell leukemia transcription factor 3 BCL11A B-cell CLL/lymphoma 11A (zinc finger protein) RNF10 ring finger protein 10 ZNF219 zinc finger protein 219 ZNF256 zinc finger protein 256 INTS4 integrator complex subunit 4 LMX1B LIM homeobox transcription factor 1, beta CREG1 Cellular repressor of E1A-stimulated genes 1 MYT1L myelin transcription factor 1-like ZNF277 zinc finger protein 277 IKZF3 IKAROS family zinc finger 3 (Aiolos) ZNF84 zinc finger protein 84 RARG retinoic acid receptor, gamma RNF103 ring finger protein 103 THRAP3 thyroid hormone receptor associated protein 3 ZMYM5 zinc finger, MYM-type 5 TNRC6A Trinucleotide repeat containing 6A NFIC nuclear factor I/C (CCAAT-binding transcription factor) LDB2 LIM domain binding 2 RUNX2 runt-related transcription factor 2 TRIP11 thyroid hormone receptor interactor 11 ECD ecdysoneless homolog (Drosophila) ZFX Zinc finger protein, X-linked NMI N-myc (and STAT) interactor RORA RAR-related orphan receptor A PCGF2 Polycomb group ring finger 2 /// zinc finger protein 144 SRA1 Steroid receptor RNA activator 1 ZFP161 zinc finger protein 161 homolog (mouse) ZFP106 zinc finger protein 106 homolog (mouse) ZNF331 zinc finger protein 331 PCAR Hypothetical protein I38022 IFRD1 Interferon-related developmental regulator 1 /// nerve growth factor-inducible protein PC4 ZMYM6 zinc finger, MYM-type 6 ZNF324 Zinc finger protein 324 ZNF225 zinc finger protein 225 NR2F1 Nuclear receptor subfamily 2, group F, member 1

UTF1 RRN3 ZNF7 RPF-1 ETS1 MYOD1 MYCBP HSPX153 NHLH2 ZNF221 ZNF297 SSX3 H-L(3)MBT FLJ11186 ZNF254 POU2F2 CTNNB1 KIAA0026 ESR1 PTTG1IP HOXA4 ZNF75A CART1 MED6 FLJ10759 CUTL1 ICBP90 WHSC1 PAX8 LMO6 POU4F1 ZNF93 P38IP CHD3 ZID FOXC2 LOC58500 CRSP6 TADA3L GATA6 CBX6 HOXA7 SAFB FOXC1 IRLB SETDB1 MDS1 CDK8 HEY2 GTF2H2 M96

8433 54700 7553 11281 2113 4654 26292 54729 4808 7638 9278 10214 83746 55320 399655 5452 1499 9643 2099 754 3201 7627 8092 10001 55223 1523 29128 7468 7849 4007 5457 81931 55578 1107 10773 2303 58500 9440 10474 2627 23466 3204 6294 2296 10260 9869 4197 1024 23493 2966 22823

1.246 1.125 1.084 1.009 0.902 1.016 1.058 1.002 1.133 1.088 0.978 1.059 0.951 1.262 0.999 1.013 1.18 0.824 1.379 1.401 1.2 1.318 1.5 1.342 1.329 1.211 1.236 1.275 1.278 1.206 1.383 1.251 1.228 1.232 1.205 1.235 1.219 1.21 1.222 1.026 1.089 1.099 1.142 1.034 1.275 0.953 1.018 1.114 1.067 1.143 0.999

0.093 0.353 0.032 0.88 0.662 0.815 0.115 0.938 0.256 0.19 0.42 0.396 0.273 0.665 0.976 0.659 0.304 0.02 0.024 0.04 0.037 4.24E-04 0.013 0.006 0.009 0.014 0.027 0.026 0.035 0.006 0.011 0.008 0.008 0.048 0.038 0.036 0.002 0.004 0.034 0.617 0.043 0.183 0.196 0.272 0.089 0.532 0.791 0.073 0.212 0.237 0.988

0.869 0.865 0.862 0.86 0.853 0.838 0.792 0.789 0.808 0.824 0.829 0.799 0.815 0.73 0.797 0.758 0.76 1.024 1.499 1.495 1.253 1.729 1.383 1.119 1.101 1.079 1.07 1.06 1.053 1.048 1.033 1.015 1.009 0.98 0.977 0.955 0.947 0.888 0.807 1.234 1.2 1.416 1.408 1.319 1.244 1.33 1.565 1.241 1.446 1.386 1.235

0.332 0.028 0.03 0.039 0.05 0.076 0.001 0.012 0.019 0.046 0.062 0.063 0.084 0.098 0.122 0.139 0.336 0.692 3.14E-04 0.001 0.051 0.08 0.095 0.586 0.104 0.587 0.082 0.23 0.124 0.508 0.688 0.786 0.863 0.758 0.67 0.524 0.062 0.334 0.021 4.37E-05 8.07E-05 0.001 0.001 0.001 0.001 0.004 0.005 0.005 0.007 0.008 0.008

1.35 1.273 1.461 1.23 1.219 1.233 1.266 1.214 1.43 1.341 1.387 1.295 1.233 1.531 1.191 1.34 1.374 1.206 1.25 1.013 1.208 1.1 1.002 1.122 1.232 1.007 0.976 1.098 0.818 0.865 1.324 1.038 0.85 0.762 1.102 1.035 1.033 1.033 0.924 0.898 1.047 0.977 1.043 0.89 0.862 0.975 1.196 1.013 1.062 0.863 0.926

0.015 0.043 0.021 0.033 0.05 0.001 0.001 0.018 0.014 0.003 0.05 0.022 0.01 0.053 0.026 0.012 0.001 0.012 0.177 0.864 0.093 0.164 0.957 0.173 0.073 0.944 0.605 0.075 0.11 0.011 0.089 0.522 0.005 0.106 0.16 0.583 0.483 0.692 0.37 0.08 0.506 0.635 0.582 0.242 0.04 0.57 0.072 0.844 0.191 0.166 0.342

UTF1 RRN3 ZNF7 POU6F2 ETS1 MYOD1 MYCBP NKX1-1 NHLH2 ZNF221 ZBTB22 SSX3 L3MBTL2 C14orf106 ZNF254 POU2F2 CTNNB1 MORF4L2 ESR1 PTTG1IP HOXA4 ZNF75A CART1 MED6 TRIM62 CUTL1 UHRF1 WHSC1 PAX8 LMO6 POU4F1 ZNF93 FAM48A CHD3 ZBTB6 FOXC2 ZNF250 CRSP6 TADA3L GATA6 CBX6 HOXA7 SAFB FOXC1 DENND4A SETDB1 MDS1 CDK8 HEY2 GTF2H2 MTF2

undifferentiated embryonic cell transcription factor 1 RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) zinc finger protein 7 POU domain, class 6, transcription factor 2 v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) myogenic differentiation 1 c-myc binding protein NK1 transcription factor related, locus 1 (Drosophila) nescient helix loop helix 2 zinc finger protein 221 zinc finger and BTB domain containing 22 synovial sarcoma, X breakpoint 3 L(3)mbt-like 2 (Drosophila) Chromosome 14 open reading frame 106 zinc finger protein 254 /// zinc finger protein 539 POU domain, class 2, transcription factor 2 /// POU domain, class 2, transcription factor 2 catenin (cadherin-associated protein), beta 1, 88kDa mortality factor 4 like 2 estrogen receptor 1 pituitary tumor-transforming 1 interacting protein homeobox A4 Zinc finger protein 75a cartilage paired-class homeoprotein 1 Mediator of RNA polymerase II transcription, subunit 6 homolog (S. cerevisiae) tripartite motif-containing 62 Cut-like 1, CCAAT displacement protein (Drosophila) ubiquitin-like, containing PHD and RING finger domains, 1 Wolf-Hirschhorn syndrome candidate 1 paired box gene 8 LIM domain only 6 POU domain, class 4, transcription factor 1 Zinc finger protein 93 family with sequence similarity 48, member A Chromodomain helicase DNA binding protein 3 Zinc finger and BTB domain containing 6 forkhead box C2 (MFH-1, mesenchyme forkhead 1) Zinc finger protein 250 cofactor required for Sp1 transcriptional activation, subunit 6, 77kDa transcriptional adaptor 3 (NGG1 homolog, yeast)-like GATA binding protein 6 chromobox homolog 6 Homeobox A7 scaffold attachment factor B forkhead box C1 DENN/MADD domain containing 4A SET domain, bifurcated 1 Myelodysplasia syndrome 1 cyclin-dependent kinase 8 Hairy/enhancer-of-split related with YRPW motif 2 General transcription factor IIH, polypeptide 2, 44kDa Metal response element binding transcription factor 2

GBX1 PAX7 HOXD4 RBBP9 HOXB8 TCEAL1 GLI KIAA0998 SSX1 TBX21 PPARG ZNF202 NFIB HOXD8 GTF2A1 NFKB2 GAS41 ZNF268 ZNF211 PRDM2 EGR1 MAF PER1 HSPC018 SSX2 LOC56270 FOG2 MAD4 HOXA3 FOXP1 C21orf18 BRD1 RNF13 HSF2BP ZIM2 BTF3L1 TITF1 MAPK8IP1 HMG2 MYT2 ZNF174 NEUROG2 TFCP2 FLJ10142 ZIC1 HRIHFB2122 TNRC3 KIAA0071 IRX7 HOXB3 SOX2

2636 5081 3233 10741 3218 9338 2735 23093 652630 30009 5468 7753 4781 3234 2957 4791 8089 10795 10520 7799 1958 4094 5187 9567 6757 56270 23414 10608 3200 27086 54093 23774 11342 11077 23619 690 7080 9479 3148 8827 7727 63973 7024 55079 7545 11078 55534 23186 79190 3213 6657

1.002 1.181 1.097 1.067 1.265 1.072 0.951 1.026 1.12 1.17 1.061 0.884 1.034 0.896 0.903 1.027 1.078 1.063 1.184 1.047 1.029 0.993 1.118 1.056 1.137 1.054 0.803 0.949 0.75 0.872 0.75 0.913 1.002 1.091 1.015 0.835 0.975 1.082 0.96 0.856 0.716 0.995 0.97 0.845 0.94 0.932 0.984 1.023 0.901 0.995 1.023

0.974 0.001 0.203 0.319 0.065 0.273 0.37 0.659 0.204 0.172 0.555 0.014 0.61 0.377 0.726 0.741 0.064 0.281 0.031 0.247 0.531 0.774 0.012 0.253 0.131 0.579 0.074 0.461 0.113 0.346 0.529 0.288 0.961 0.361 0.742 0.125 0.832 0.223 0.282 0.238 0.055 0.862 0.758 0.212 0.318 0.29 0.693 0.386 0.166 0.793 0.501

1.208 1.407 1.217 1.312 1.197 1.306 1.395 1.262 1.25 1.4 1.535 1.396 1.363 1.267 1.429 1.565 1.217 1.57 1.413 1.351 1.22 1.21 1.264 1.325 1.546 1.294 0.589 0.826 0.594 0.739 0.675 0.579 0.807 0.798 0.737 0.666 0.821 0.798 0.715 0.771 0.596 0.813 0.784 0.524 0.775 0.693 0.783 0.789 0.757 0.638 0.58

0.008 0.011 0.011 0.013 0.013 0.014 0.019 0.019 0.02 0.022 0.023 0.023 0.027 0.027 0.028 0.033 0.035 0.037 0.038 0.038 0.038 0.038 0.04 0.043 0.044 0.049 2.14E-05 7.90E-05 1.94E-04 3.13E-04 0.001 0.001 0.002 0.003 0.003 0.003 0.004 0.004 0.004 0.005 0.005 0.006 0.006 0.007 0.008 0.008 0.009 0.01 0.01 0.01 0.013

0.848 0.879 1.035 0.77 0.952 0.854 0.939 1.269 1.125 1.044 1.04 1.2 1.339 1.052 1.346 0.97 1.156 0.947 1.074 0.859 0.845 0.857 1.029 1.189 1.157 1.213 0.811 1.039 1.006 0.95 0.713 0.909 1.1 1 0.978 1.054 0.923 0.943 1.177 0.836 1.151 1.002 1.047 1.2 1.128 0.823 1.009 0.967 0.858 1.075 1.016

0.072 0.066 0.363 0.402 0.355 0.025 0.604 0.06 0.432 0.508 0.489 0.133 0.202 0.532 0.109 0.584 0.053 0.193 0.123 0.028 0.175 0.002 0.657 0.005 0.105 0.092 0.341 0.659 0.884 0.211 0.09 0.27 0.421 0.999 0.53 0.561 0.156 0.384 0.039 0.196 0.23 0.974 0.438 0.069 0.841 0.197 0.819 0.6 0.002 0.172 0.773

GBX1 PAX7 HOXD4 RBBP9 HOXB8 TCEAL1 GLI TTLL5 SSX1 TBX21 PPARG ZNF202 NFIB HOXD8 GTF2A1 NFKB2 YEATS4 ZNF268 ZNF211 PRDM2 EGR1 MAF PER1 GTPBP1 SSX2 WDR45L ZFPM2 MXD4 HOXA3 FOXP1 SETD4 BRD1 RNF13 HSF2BP ZIM2 BTF3L1 TITF1 MAPK8IP1 HMGB2 MYT2 ZNF174 NEUROG2 TFCP2 FEZF2 ZIC1 TRIOBP MAML3 RCOR1 IRX6 HOXB3 SOX2

gastrulation brain homeobox 1 paired box gene 7 homeobox D4 retinoblastoma binding protein 9 homeobox B8 transcription elongation factor A (SII)-like 1 glioma-associated oncogene homolog 1 (zinc finger protein) Tubulin tyrosine ligase-like family, member 5 synovial sarcoma, X breakpoint 1 /// similar to synovial sarcoma, X breakpoint 9 T-box 21 peroxisome proliferative activated receptor, gamma zinc finger protein 202 nuclear factor I/B Homeobox D8 general transcription factor IIA, 1, 19/37kDa nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) YEATS domain containing 4 Zinc finger protein 268 zinc finger protein 211 PR domain containing 2, with ZNF domain early growth response 1 V-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) period homolog 1 (Drosophila) GTP binding protein 1 synovial sarcoma, X breakpoint 2 WDR45-like Friend of GATA2 /// zinc finger protein, multitype 2 MAX dimerization protein 4 homeobox A3 /// homeobox A3 Forkhead box P1 SET domain containing 4 bromodomain containing 1 ring finger protein 13 Heat shock transcription factor 2 binding protein zinc finger, imprinted 2 basic transcription factor 3, like 1 thyroid transcription factor 1 mitogen-activated protein kinase 8 interacting protein 1 high-mobility group box 2 Myelin transcription factor 2 zinc finger protein 174 neurogenin 2 transcription factor CP2 FEZ family zinc finger 2 Zic family member 1 (odd-paired homolog, Drosophila) TRIO and F-actin binding protein mastermind-like 3 (Drosophila) REST corepressor 1 iroquois homeobox protein 6 homeobox B3 SRY (sex determining region Y)-box 2

LOC91120 GTF2I ZNF294 ATF4 ZNF142 MSC GIOT-2 NR2E3 BCL11B NCOR1 MORF RNF14 PURA RARA TCFL5 LOC57167 TRIP15 PREB MAX THRA TEAD3 ZNF80 DRPLA ZNF76 KIAA0173 TAF2N HCNGP MEF2B TAL2 POU4F2 TAF-172 PAF65A NEUROD6 SDCCAG33 TRIM15 PMX1 GBX2 MTA1 TNRC5 ARIX PRDM13 FOXH1 RNF4 PAX1 FLJ20595 DEAF1 KIAA1041 HHEX LOC51058 NFKBIL1 BTEB1

91120 2969 26046 468 7701 9242 51710 10002 64919 9611 23522 9604 5813 5914 10732 57167 9318 10113 4149 7067 7005 7634 1822 7629 9654 8148 29115 4207 6887 5458 9044 10629 63974 10194 89870 5396 2637 9112 10695 401 59336 8928 6047 5075 54993 10522 22887 3087 51058 4795 687

0.94 1.026 1.154 0.983 0.983 0.813 0.85 1.093 0.88 0.906 0.953 0.907 0.977 0.913 0.806 0.816 0.682 0.542 0.683 0.827 0.823 0.824 0.817 0.687 0.412 0.812 0.651 0.468 0.771 0.731 0.745 0.603 0.737 0.827 0.795 0.783 0.457 0.747 0.623 0.805 0.549 0.678 0.666 0.719 0.8 0.72 0.767 1.26 1.258 1.256 1.245

0.241 0.757 0.19 0.565 0.747 0.1 0.105 0.556 0.037 0.688 0.476 0.413 0.658 0.334 0.052 0.014 0.003 0.009 0.002 0.017 0.014 1.30E-04 0.054 0.012 0.002 0.018 0.023 0.006 4.09E-04 0.011 0.005 0.041 0.025 0.051 0.036 0.04 0.004 0.038 0.026 0.004 0.019 0.003 0.001 1.00E-05 0.017 0.004 0.027 0.009 0.008 0.047 0.048

0.825 0.802 0.746 0.556 0.83 0.773 0.733 0.808 0.786 0.766 0.775 0.785 0.792 0.762 1.761 1.393 1.131 1.09 1.042 1.039 1.007 0.999 0.975 0.973 0.948 0.937 0.923 0.915 0.891 0.86 0.838 0.368 0.691 0.816 0.708 0.629 0.496 0.681 0.454 0.785 0.4 0.732 0.654 0.822 0.634 0.555 0.827 1.37 1.117 1.079 0.977

0.014 0.015 0.02 0.02 0.021 0.022 0.022 0.024 0.025 0.025 0.03 0.031 0.044 0.044 0.052 0.132 0.101 0.638 0.898 0.763 0.882 0.987 0.517 0.583 0.24 0.319 0.144 0.449 0.267 0.133 0.12 1.48E-05 1.20E-04 0.001 0.001 0.002 0.003 0.005 0.005 0.007 0.013 0.017 0.023 0.085 0.102 0.127 0.299 0.003 0.314 0.376 0.588

0.973 0.733 1 1.062 1.038 1.057 0.955 0.995 0.985 1.327 0.963 1.015 0.908 0.984 1.06 1.125 0.962 0.819 1.099 1.045 0.916 0.919 0.881 0.932 0.786 0.846 0.918 1.158 1.019 0.648 0.846 0.741 0.736 0.93 0.965 0.808 0.867 0.856 1 0.959 0.665 0.835 0.984 1.007 0.825 0.976 0.861 0.714 0.709 0.83 0.829

0.699 0.133 0.997 0.533 0.745 0.398 0.435 0.875 0.84 0.092 0.441 0.835 0.185 0.56 0.24 0.307 0.455 0.091 0.041 0.539 0.047 0.116 0.348 0.436 0.078 0.04 0.306 0.079 0.823 0.301 0.116 0.346 0.086 0.176 0.497 0.164 0.087 0.106 0.997 0.669 0.104 0.073 0.936 0.915 0.067 0.6 0.061 0.005 0.033 0.007 0.012

ZNF682 GTF2I ZNF294 ATF4 ZNF142 MSC ZNF44 NR2E3 BCL11B NCOR1 MYST4 RNF14 PURA RARA TCFL5 SALL4 COPS2 PREB MAX THRA TEAD3 ZNF80 ATN1 ZNF76 TTLL4 TAF15 SAP30BP MEF2B TAL2 POU4F2 BTAF1 TAF6L NEUROD6 TSHZ1 TRIM15 PRRX1 GBX2 MTA1 TNRC5 PHOX2A PRDM13 FOXH1 RNF4 PAX1 ZSCAN2 DEAF1 FOXJ3 HHEX ZNF691 NFKBIL1 KLF9

Zinc finger protein 682 General transcription factor II, i zinc finger protein 294 activating transcription factor 4 (tax-responsive enhancer element B67) zinc finger protein 142 Musculin (activated B-cell factor-1) Zinc finger protein 44 nuclear receptor subfamily 2, group E, member 3 B-cell CLL/lymphoma 11B (zinc finger protein) Nuclear receptor co-repressor 1 MYST histone acetyltransferase (monocytic leukemia) 4 ring finger protein 14 purine-rich element binding protein A retinoic acid receptor, alpha Transcription factor-like 5 (basic helix-loop-helix) Sal-like 4 (Drosophila) COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis) Prolactin regulatory element binding MYC associated factor X thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, av TEA domain family member 3 Zinc finger protein 80 Atrophin 1 zinc finger protein 76 (expressed in testis) Tubulin tyrosine ligase-like family, member 4 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa SAP30 binding protein MADS box transcription enhancer factor 2, polypeptide B (myocyte enhancer factor 2B) T-cell acute lymphocytic leukemia 2 POU domain, class 4, transcription factor 2 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa neurogenic differentiation 6 teashirt family zinc finger 1 tripartite motif-containing 15 Paired related homeobox 1 gastrulation brain homeobox 2 Metastasis associated 1 trinucleotide repeat containing 5 Paired-like (aristaless) homeobox 2a PR domain containing 13 Forkhead box H1 ring finger protein 4 Paired box gene 1 Zinc finger and SCAN domain containing 2 deformed epidermal autoregulatory factor 1 (Drosophila) Forkhead box J3 homeobox, hematopoietically expressed Zinc finger protein 691 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 Kruppel-like factor 9

RXRB PAX5 HDAC4 EOMES HOXC8 GABPB1 IRF5 ARNT PPARD FOXO3A RELB HKR3 ERCC6 HOXC13 TEF ELF2 GTF2H4 HOXD1 FOXF2 POU2F1 HOXB1 HOXA6 HOXC5 HOXD12 FHX DRIL1 MSX2 PER3 HIRA GFI1B GLI3 HNF3G GTF3C4 E2F4 HAND2 HIF1A FLI1 RFXANK GFI1 EZH2 HOXC6 ERCC3 E2F6 HOXB7 ATF3 ESRRG E2F3 EGR3 NEUROG1 EBF NR2C1

6257 5079 9759 8320 3224 2553 3663 405 5467 2309 5971 3104 2074 3229 7008 1998 2968 3231 2295 5451 3211 3203 3222 3238 55810 1820 4488 8863 7290 8328 2737 3171 9329 1874 9464 3091 2313 8625 2672 2146 3223 2071 1876 3217 467 2104 1871 1960 4762 1879 7181

1.27 1.215 1.137 1.142 1.001 1.081 0.875 1.004 1.027 1.134 1.04 0.983 0.925 0.983 0.902 0.951 1.149 1.092 1.121 0.943 0.907 0.952 0.923 0.913 1.043 0.901 1.042 0.988 1.023 0.907 1.072 1.159 0.918 1.128 0.943 1.013 0.988 0.863 1.009 0.969 0.914 1.045 0.986 1.119 1.02 1.016 1.074 0.921 1.019 0.837 0.993

0.006 0.026 4.52E-05 0.032 0.983 0.22 0.028 0.918 0.524 1.12E-04 0.341 0.795 0.071 0.572 0.247 0.048 0.098 0.158 0.304 0.192 0.077 0.584 0.703 0.049 0.375 0.32 0.174 0.808 0.547 0.027 0.204 0.081 0.09 0.07 0.072 0.784 0.667 0.085 0.842 0.397 0.737 0.151 0.629 0.109 0.654 0.629 0.197 0.008 0.647 0.105 0.859

0.97 0.946 1.252 1.3 1.225 1.233 1.21 1.204 1.217 1.243 1.203 1.228 1.293 1.221 1.226 1.223 1.348 1.275 1.224 1.276 1.24 1.316 1.21 1.182 1.181 1.173 1.168 1.168 1.164 1.162 1.157 1.156 1.152 1.15 1.148 1.148 1.143 1.141 1.135 1.135 1.134 1.128 1.128 1.127 1.127 1.124 1.124 1.124 1.124 1.119 1.116

0.543 0.247 1.63E-04 0.001 0.001 0.002 0.002 0.003 0.007 0.013 0.015 0.023 0.026 0.033 0.039 0.046 0.047 0.057 0.063 0.078 0.093 0.11 0.131 0.003 0.066 0.312 0.058 0.078 0.004 0.074 0.09 0.045 0.27 0.009 0.004 0.073 0.046 0.77 0.265 0.044 0.14 0.004 0.024 0.401 0.011 0.14 0.117 0.139 0.292 0.289 0.409

0.705 0.727 0.802 0.796 0.722 0.793 0.806 0.776 0.782 0.817 0.76 0.819 0.829 0.743 0.717 0.802 0.777 0.795 0.682 0.823 0.815 0.764 0.827 0.769 0.77 0.715 0.75 0.692 0.79 0.789 0.821 0.782 0.778 0.7 0.802 0.749 0.722 0.733 0.781 0.781 0.655 0.807 0.77 0.738 0.607 0.817 0.785 0.784 0.689 0.667 0.668

0.015 0.047 7.38E-04 0.048 0.018 0.017 4.40E-06 0.001 0.005 0.004 0.015 1.90E-04 0.006 0.005 0.022 0.037 2.56E-04 0.017 0.013 0.036 0.021 0.008 0.021 0.002 0.001 0.002 0.014 0.025 0.019 5.82E-04 0.042 0.017 0.01 0.015 0.044 0.032 0.013 0.001 3.56E-04 0.027 0.001 0.033 0.014 0.001 0.013 0.044 0.002 2.51E-04 0.007 0.001 0.022

RXRB PAX5 HDAC4 EOMES HOXC8 GABPB1 IRF5 ARNT PPARD FOXO3A RELB HKR3 ERCC6 HOXC13 TEF ELF2 GTF2H4 HOXD1 FOXF2 POU2F1 HOXB1 HOXA6 HOXC5 HOXD12 FOXJ2 ARID3A MSX2 PER3 HIRA GFI1B GLI3 FOXA3 GTF3C4 E2F4 HAND2 HIF1A FLI1 RFXANK GFI1 EZH2 HOXC6 ERCC3 E2F6 HOXB7 ATF3 ESRRG E2F3 EGR3 NEUROG1 EBF NR2C1

retinoid X receptor, beta Paired box gene 5 (B-cell lineage specific activator) histone deacetylase 4 eomesodermin homolog (Xenopus laevis) homeobox C8 GA binding protein transcription factor, beta subunit 1, 53kDa interferon regulatory factor 5 aryl hydrocarbon receptor nuclear translocator peroxisome proliferative activated receptor, delta Forkhead box O3A v-rel reticuloendotheliosis viral oncogene homolog B, nuclear factor of kappa light polypeptide GLI-Kruppel family member HKR3 excision repair cross-complementing rodent repair deficiency, complementation group 6 homeobox C13 Thyrotrophic embryonic factor E74-like factor 2 (ets domain transcription factor) general transcription factor IIH, polypeptide 4, 52kDa homeobox D1 forkhead box F2 POU domain, class 2, transcription factor 1 homeobox B1 Homeobox A6 Homeobox C5 homeobox D12 forkhead box J2 AT rich interactive domain 3A (BRIGHT- like) msh homeobox homolog 2 (Drosophila) period homolog 3 (Drosophila) HIR histone cell cycle regulation defective homolog A (S. cerevisiae) Growth factor independent 1B (potential regulator of CDKN1A, translocated in CML) GLI-Kruppel family member GLI3 (Greig cephalopolysyndactyly syndrome) forkhead box A3 general transcription factor IIIC, polypeptide 4, 90kDa E2F transcription factor 4, p107/p130-binding heart and neural crest derivatives expressed 2 hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) Friend leukemia virus integration 1 regulatory factor X-associated ankyrin-containing protein growth factor independent 1 enhancer of zeste homolog 2 (Drosophila) Homeobox C6 excision repair cross-complementing rodent repair deficiency, complementation group 3 (xerod E2F transcription factor 6 homeobox B7 activating transcription factor 3 estrogen-related receptor gamma E2F transcription factor 3 early growth response 3 neurogenin 1 early B-cell factor nuclear receptor subfamily 2, group C, member 1

SNAPC3 DSIPI GTF3C1 GABPA ATF5 KLHL4 POU4F3 POU5F1 RBL2 LDB1 TBX10 NR0B1 DLX3 NFE2L2 HSPC189 GCN5L2 PAX4 GTF2E1 NFATC3 ATF6 HOXB13 EP300 MEOX1 SHOX IRX4 NR2F6 NAB2 PRDM12 ZNF205 CBX1 HOXA2 SREBF2 SURB7 NRIP1 CHD4 RNF24 CREBBP ICSBP1 CREM GTF3C2 BARX2 TAF2C2 RBL1 ID3 TCF3 HNF3A NR5A1 IGHMBP2 SPIB EZH1 AHR

6619 1831 2975 2551 22809 56062 5459 5460 5934 8861 347853 190 1747 4780 51545 2648 5078 2960 4775 22926 10481 2033 4222 6473 50805 2063 4665 59335 7755 10951 3199 6721 9412 8204 1108 11237 1387 3394 1390 2976 8538 6875 5933 3399 6929 3169 2516 3508 6689 2145 196

1.021 1.154 0.874 1.057 0.964 1.01 1.029 0.998 1.057 1.005 1.067 1.005 1.024 1.01 1.018 0.989 0.86 0.763 1.021 1.028 0.907 1.013 1.007 0.883 0.929 1.049 1.039 1.009 0.983 0.977 1.086 0.835 1.006 1.019 0.911 1.072 0.882 1.025 0.976 1.003 1.103 1.048 0.983 0.944 1.015 0.901 0.979 1 1.107 0.915 1.023

0.601 0.387 0.136 0.097 0.187 0.892 0.477 0.967 0.413 0.931 0.761 0.913 0.57 0.78 0.616 0.582 0.001 0.063 0.406 0.554 0.111 0.683 0.826 0.001 0.096 0.35 0.399 0.89 0.691 0.494 0.063 0.228 0.798 0.645 0.224 0.166 0.258 0.293 0.321 0.872 0.302 0.422 0.665 0.261 0.718 0.074 0.258 0.999 0.326 0.233 0.335

1.109 1.106 1.092 1.09 1.09 1.089 1.089 1.088 1.088 1.083 1.076 1.075 1.074 1.071 1.067 1.06 1.057 1.055 1.055 1.053 1.052 1.052 1.044 1.043 1.04 1.039 1.039 1.036 1.036 1.036 1.035 1.033 1.033 1.031 1.03 1.029 1.028 1.026 1.025 1.023 1.021 1.018 1.017 1.015 1.015 1.014 1.011 1.009 1.006 1.006 1.006

0.388 0.075 0.121 0.132 0.182 0.247 0.397 0.56 0.109 0.063 0.212 0.258 0.33 0.195 0.619 0.42 0.18 0.245 0.189 0.343 0.305 0.207 0.177 0.376 0.363 0.478 0.374 0.241 0.27 0.754 0.41 0.598 0.415 0.443 0.293 0.736 0.49 0.479 0.802 0.628 0.528 0.727 0.598 0.721 0.779 0.818 0.774 0.722 0.859 0.909 0.911

0.521 0.813 0.682 0.72 0.524 0.775 0.613 0.733 0.678 0.808 0.79 0.777 0.763 0.785 0.826 0.721 0.807 0.821 0.778 0.814 0.793 0.71 0.804 0.68 0.649 0.792 0.766 0.809 0.803 0.595 0.729 0.703 0.654 0.802 0.582 0.718 0.822 0.766 0.652 0.819 0.728 0.701 0.819 0.814 0.758 0.75 0.814 0.749 0.809 0.729 0.691

0.003 0.003 0.005 0.007 0.011 0.04 0.001 0.002 0.04 0.023 1.56E-05 4.65E-04 2.32E-04 0.003 0.044 0.019 0.023 0.008 0.005 0.048 0.003 0.005 0.006 0.001 0.003 0.043 0.008 0.013 0.041 0.006 0.002 0.004 0.021 4.46E-05 0.005 0.009 0.033 4.55E-05 0.017 0.002 0.005 0.027 0.001 0.009 3.60E-04 0.004 0.012 4.02E-04 0.007 0.001 0.013

SNAPC3 TSC22D3 GTF3C1 GABPA ATF5 KLHL4 POU4F3 POU5F1 RBL2 LDB1 TBX10 NR0B1 DLX3 NFE2L2 ZNF581 GCN5L2 PAX4 GTF2E1 NFATC3 ATF6 HOXB13 EP300 MEOX1 SHOX IRX4 NR2F6 NAB2 PRDM12 ZNF205 CBX1 HOXA2 SREBF2 SURB7 NRIP1 CHD4 RNF24 CREBBP IRF8 CREM GTF3C2 BARX2 TAF4B RBL1 ID3 TCF3 FOXA1 NR5A1 IGHMBP2 SPIB EZH1 AHR

small nuclear RNA activating complex, polypeptide 3, 50kDa TSC22 domain family, member 3 general transcription factor IIIC, polypeptide 1, alpha 220kDa GA binding protein transcription factor, alpha subunit 60kDa /// GA binding protein transcripti activating transcription factor 5 Kelch-like 4 (Drosophila) POU domain, class 4, transcription factor 3 POU domain, class 5, transcription factor 1 /// POU domain, class 5, transcription factor 1 pseu retinoblastoma-like 2 (p130) LIM domain binding 1 T-box 10 nuclear receptor subfamily 0, group B, member 1 Distal-less homeobox 3 nuclear factor (erythroid-derived 2)-like 2 zinc finger protein 581 GCN5 general control of amino-acid synthesis 5-like 2 (yeast) paired box gene 4 general transcription factor IIE, polypeptide 1, alpha 56kDa nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 activating transcription factor 6 Homeobox B13 E1A binding protein p300 mesenchyme homeobox 1 short stature homeobox iroquois homeobox protein 4 nuclear receptor subfamily 2, group F, member 6 NGFI-A binding protein 2 (EGR1 binding protein 2) PR domain containing 12 Zinc finger protein 205 /// zinc finger protein 205 chromobox homolog 1 (HP1 beta homolog Drosophila ) homeobox A2 sterol regulatory element binding transcription factor 2 SRB7 suppressor of RNA polymerase B homolog (yeast) nuclear receptor interacting protein 1 Chromodomain helicase DNA binding protein 4 Ring finger protein 24 CREB binding protein (Rubinstein-Taybi syndrome) interferon regulatory factor 8 /// interferon regulatory factor 8 cAMP responsive element modulator General transcription factor IIIC, polypeptide 2, beta 110kDa BarH-like homeobox 2 TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa retinoblastoma-like 1 (p107) inhibitor of DNA binding 3, dominant negative helix-loop-helix protein transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) Forkhead box A1 nuclear receptor subfamily 5, group A, member 1 immunoglobulin mu binding protein 2 Spi-B transcription factor (Spi-1/PU.1 related) /// Spi-B transcription factor (Spi-1/PU.1 related Enhancer of zeste homolog 1 (Drosophila) aryl hydrocarbon receptor

BCL6 TAF2C1 SPI1 POU3F4 KIAA0441 TBX6 BRPF3 EN2 TBP MGC2508 SUPT3H GCN5L1 SIM2 ATF7 FOXF1 KLF15 STAT6 EMX2 FOXM1 CSDA FLJ20321 SIX2 H_GS165L15 CTCF ILF1 TFAP2A TFAP4 RBPSUHL BRF2 SUPT4H1 DNAJ NR1H3 POU2AF1 GLIS2 SIX1 ATF2 HOXA9 CREB1 HOXA13 POU6F1 DLX6 PROX1 SRF CBX4 IRF1 NCOA3 FHL2 HRIHFB2436 BACH1 NFX1 SATB1

604 6874 6688 5456 9841 6911 27154 2020 6908 79177 8464 2647 6493 11016 2294 28999 6778 2018 2305 8531 54897 10736 9586 10664 3607 7020 7023 11317 55290 6827 10294 10062 5450 84662 6495 1386 3205 1385 3209 5463 1750 5629 6722 8535 3659 8202 2274 24149 571 4799 6304

0.997 0.945 1.056 0.964 0.929 1.099 1.06 0.916 1.159 0.994 0.991 1.037 0.983 1.243 0.974 0.997 0.995 0.916 0.992 1.126 0.897 0.901 0.99 0.968 1.057 0.897 0.896 0.846 1.079 0.92 1.054 1.173 0.941 1.149 0.991 1.133 1.128 1.055 0.918 0.729 0.978 1.02 0.947 0.985 0.942 0.957 0.973 1.113 1.015 1.04 1.021

0.919 0.169 0.46 0.463 0.663 0.248 0.22 0.379 0.279 0.883 0.844 0.41 0.669 0.103 0.458 0.953 0.769 0.118 0.807 0.227 0.36 0.002 0.843 0.323 0.393 0.298 0.027 0.08 0.468 0.067 0.319 0.09 0.328 0.651 0.766 0.298 0.191 0.404 0.124 0.24 0.63 0.64 0.212 0.634 0.694 0.301 0.763 0.069 0.799 0.328 0.624

1.002 1.001 1.001 1 1 1 0.997 0.994 0.994 0.989 0.988 0.987 0.985 0.984 0.981 0.979 0.971 0.971 0.962 0.961 0.957 0.957 0.953 0.951 0.947 0.944 0.94 0.939 0.938 0.936 0.933 0.927 0.926 0.925 0.924 0.923 0.921 0.918 0.916 0.916 0.913 0.912 0.9 0.884 0.88 0.878 0.868 0.864 0.861 0.857 0.852

0.958 0.986 0.989 0.991 0.992 0.988 0.949 0.901 0.918 0.87 0.511 0.868 0.701 0.824 0.765 0.65 0.633 0.308 0.32 0.342 0.408 0.254 0.521 0.266 0.258 0.119 0.234 0.189 0.095 0.547 0.1 0.164 0.193 0.193 0.434 0.479 0.907 0.175 0.936 0.26 0.041 0.691 0.037 0.003 0.461 0.077 0.101 0.062 0.201 0.373 0.155

0.82 0.791 0.717 0.806 0.792 0.785 0.793 0.758 0.685 0.717 0.784 0.759 0.817 0.65 0.758 0.79 0.772 0.734 0.782 0.68 0.817 0.67 0.79 0.644 0.672 0.808 0.725 0.678 0.525 0.614 0.74 0.772 0.83 0.819 0.748 0.654 0.757 0.707 0.821 0.786 0.708 0.784 0.723 0.716 0.622 0.818 0.829 0.752 0.618 0.726 0.805

0.015 0.005 1.43E-04 0.004 4.95E-04 0.012 0.004 4.27E-05 0.003 0.01 0.004 2.62E-04 0.022 0.006 0.005 0.016 0.019 0.016 0.005 0.001 0.002 3.94E-04 0.001 0.003 0.002 0.015 0.003 0.008 0.045 0.047 0.001 0.009 0.006 0.014 2.14E-06 0.023 0.038 0.004 0.015 0.051 0.001 0.002 0.011 0.004 0.009 0.021 0.003 0.022 0.005 0.004 0.01

BCL6 TAF4 SPI1 POU3F4 ZBTB24 TBX6 BRPF3 EN2 TBP ZNF576 SUPT3H BLOC1S1 SIM2 ATF7 FOXF1 KLF15 STAT6 EMX2 FOXM1 CSDA CASZ1 SIX2 CREB5 CTCF FOXK2 TFAP2A TFAP4 RBPSUHL BRF2 SUPT4H1 DNAJA2 NR1H3 POU2AF1 GLIS2 SIX1 ATF2 HOXA9 CREB1 HOXA13 POU6F1 DLX6 PROX1 SRF CBX4 IRF1 NCOA3 FHL2 ZNF318 BACH1 NFX1 SATB1

B-cell CLL/lymphoma 6 (zinc finger protein 51) /// B-cell CLL/lymphoma 6 (zinc finger prote TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa spleen focus forming virus (SFFV) proviral integration oncogene spi1 POU domain, class 3, transcription factor 4 zinc finger and BTB domain containing 24 T-box 6 bromodomain and PHD finger containing, 3 Engrailed homolog 2 TATA box binding protein /// spinocerebellar ataxia 17 Zinc finger protein 576 suppressor of Ty 3 homolog (S. cerevisiae) Biogenesis of lysosome-related organelles complex-1, subunit 1 single-minded homolog 2 (Drosophila) Activating transcription factor 7 forkhead box F1 Kruppel-like factor 15 signal transducer and activator of transcription 6, interleukin-4 induced empty spiracles homolog 2 (Drosophila) forkhead box M1 cold shock domain protein A Castor homolog 1, zinc finger (Drosophila) sine oculis homeobox homolog 2 (Drosophila) cAMP responsive element binding protein 5 CCCTC-binding factor (zinc finger protein) Forkhead box K2 Transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) transcription factor AP-4 (activating enhancer binding protein 4) recombining binding protein suppressor of hairless (Drosophila)-like BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like suppressor of Ty 4 homolog 1 (S. cerevisiae) DnaJ (Hsp40) homolog, subfamily A, member 2 nuclear receptor subfamily 1, group H, member 3 POU domain, class 2, associating factor 1 GLIS family zinc finger 2 sine oculis homeobox homolog 1 (Drosophila) activating transcription factor 2 homeobox A9 cAMP responsive element binding protein 1 homeobox A13 POU domain, class 6, transcription factor 1 distal-less homeobox 6 prospero-related homeobox 1 Serum response factor (c-fos serum response element-binding transcription factor) chromobox homolog 4 (Pc class homolog, Drosophila) interferon regulatory factor 1 Nuclear receptor coactivator 3 four and a half LIM domains 2 Zinc finger protein 318 BTB and CNC homology 1, basic leucine zipper transcription factor 1 nuclear transcription factor, X-box binding 1 special AT-rich sequence binding protein 1 (binds to nuclear matrix/scaffold-associating DNA

MYBL2 TAF2H LAF4 ATBF1 LDOC1 SIX3 FKHL18 KLF5 KIAA0130 RORC JUND ZNF38 NR1I3 LIM FHL1 PRDM15 NFE2L1 GTF2F1 CITED1 ONECUT2 CL469780 NR4A1 SIX4 IRF2 ZNF10 CIAO1 MYF5 LMO1 GTF2E2

4605 6881 3899 463 23641 6496 2307 688 9862 6097 3727 7589 9970 10611 2273 63977 4779 2962 4435 9480 27246 3164 51804 3660 7556 9391 4617 4004 2961

1.131 0.774 1.109 1.142 0.939 0.997 0.941 0.939 0.71 1.042 0.929 0.702 0.881 1.107 0.825 0.926 0.704 0.785 0.617 0.839 0.814 0.789 0.621 0.8 0.324 0.622 0.656 0.696 0.75

0.17 0.19 0.708 0.186 0.495 0.949 0.381 0.439 0.074 0.768 0.58 0.08 0.351 0.006 0.087 0.556 0.048 0.018 0.003 0.002 0.007 0.005 0.009 0.021 0.003 0.023 0.017 0.012 0.012

0.844 0.652 0.594 0.83 0.747 0.832 0.81 0.832 0.755 0.726 0.71 0.598 0.691 0.778 0.802 0.83 1.156 1.019 0.954 0.899 0.863 0.855 0.681 0.754 0.271 0.458 0.538 0.773 0.781

0.234 4.26E-04 0.003 0.02 0.021 0.025 0.025 0.027 0.031 0.031 0.041 0.045 0.05 0.078 0.13 0.327 0.315 0.759 0.263 0.009 0.049 0.155 4.65E-04 0.001 0.002 0.003 0.007 0.01 0.161

0.726 0.641 0.706 0.593 0.748 0.651 0.721 0.827 0.671 0.603 0.734 0.727 0.803 0.806 0.736 0.68 0.761 0.586 0.718 0.77 0.822 0.77 0.624 0.521 0.604 0.691 0.802 0.681 0.837

0.004 0.003 0.025 0.001 0.006 0.002 1.51E-05 0.021 0.051 0.002 0.009 0.015 0.001 0.045 0.009 4.77E-04 0.017 6.01E-05 0.002 0.008 0.004 0.021 0.002 0.01 0.028 0.034 0.053 0.003 0.032

MYBL2 TAF10 AFF3 ATBF1 LDOC1 SIX3 FKHL18 KLF5 THRAP4 RORC JUND ZNF38 NR1I3 PDLIM5 FHL1 PRDM15 NFE2L1 GTF2F1 CITED1 ONECUT2 ZNF364 NR4A1 SIX4 IRF2 ZNF10 CIAO1 MYF5 LMO1 GTF2E2

v-myb myeloblastosis viral oncogene homolog (avian)-like 2 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa AF4/FMR2 family, member 3 AT-binding transcription factor 1 Leucine zipper, down-regulated in cancer 1 sine oculis homeobox homolog 3 (Drosophila) forkhead-like 18 (Drosophila) Kruppel-like factor 5 (intestinal) Thyroid hormone receptor associated protein 4 RAR-related orphan receptor C jun D proto-oncogene Zinc finger protein 38 Nuclear receptor subfamily 1, group I, member 3 PDZ and LIM domain 5 four and a half LIM domains 1 PR domain containing 15 /// similar to PR domain containing 15 nuclear factor (erythroid-derived 2)-like 1 general transcription factor IIF, polypeptide 1, 74kDa Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 one cut domain, family member 2 zinc finger protein 364 nuclear receptor subfamily 4, group A, member 1 Sine oculis homeobox homolog 4 (Drosophila) Interferon regulatory factor 2 zinc finger protein 10 Cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae) myogenic factor 5 LIM domain only 1 (rhombotin 1) General transcription factor IIE, polypeptide 2, beta 34kDa

BP)-associated factor, 100kDa

selective LIM binding factor homolog

polymerase I, C, 110kDa

wth factor-inducible protein PC4

n, class 2, transcription factor 2

omolog (S. cerevisiae)

rcoma, X breakpoint 9

B-cells 2 (p49/p100)

viral (v-erb-a) oncogene homolog, avian)

TBP)-associated factor, 68kDa (myocyte enhancer factor 2B)

associated, 170kDa (Mot1 homolog, S. cerevisiae) or (PCAF)-associated factor, 65kDa

B-cells inhibitor-like 1

lear factor of kappa light polypeptide gene enhancer in B-cells 3 (avian)

ncy, complementation group 6

KN1A, translocated in CML) dactyly syndrome)

-helix transcription factor)

ncy, complementation group 3 (xeroderma pigmentosum group B complementing)

Da /// GA binding protein transcription factor, alpha subunit pseudogene

n, class 5, transcription factor 1 pseudogene 1 /// similar to POU domain, class 5, transcription factor 1-like protein 3

TBP)-associated factor, 105kDa

ding factors E12/E47)

anscription factor (Spi-1/PU.1 related)

CLL/lymphoma 6 (zinc finger protein 51) BP)-associated factor, 135kDa

ng protein 2 alpha)

ion factor, BRF1-like

ing transcription factor)

ar matrix/scaffold-associating DNA's)

TBP)-associated factor, 30kDa

rboxy-terminal domain, 1