phosphatidylinositol-4-phosphate 5-kinase, type I, alpha ... coatomer protein complex, subunit alpha ... heat shock protein 90kDa beta (Grp94), member 1.
Outputs sequences between a minimal length and a maximum length. Trim sequences fastx_trimmer. The Galaxy devteam fastx_toolkit 0.0.13. sRbowtie.
HWE rs11206510. 1. 55,268,627. C/T. C. 0.16. A/G. G. 0.19 0.987 0.438 rs17114036. 1. 56,735,409. A/G. G. 0.11. A/G. G. 0.11 0.924 0.229 rs599839. 1.
Footnotes: (1) A generous gift from J. Kaufman, University of Cambridge, UK. (Kaufman et al. 1990, J. Immunol 133, 2258-2272). (2) Putative anti-CD11c.
Supplementary Table S1. Unfavorable immunocellular factors for patients with. DLBCL. Parameters. Unfavorable factor. Uni
Formation of a stable ternary complex between Cas1-Cas2, protospacer P1 and CRISPR- containing plasmid pCOLA-Z0. Samples contained combinations of ...
The sample preparation process was carried out using the automated ... For ions with counts greater than 2 million, an accurate mass measurement ... Ions with less than two million counts require fragmentation ...... Carbohydrate. Glycolysis. TCA cyc
unilaterallary in PVN, paraventricular nucleus; LC, locus ceruleus; VMH, ventromedial hypothalamus; NTS, nucleus of the solitary tract; DMV, dorsal motor ...
EGFR-TKIs. Pre EGFR-TKI treatment. Types of EGFR mutation. No. Post EGFR-TKI. T790M (%). P. Our study. Gefitinib,. Erlotinib or. Afatinib. Exon 19 deletion.
Comparative pharmacokinetics of caffeine and its primary demethylated metabolites paraxanthine, theobromine and theophylline in man. Br J Clin. Pharmacol.
Incorporation efficiency of azido-modified nucleotide analogs showed ... and nucleotide composition of a sequencing library synthesized by the phosphoramidite.
Hyslop L, Stojkovic M, Armstrong L, Walter T, Stojkovic P, Przyborski S, .... Matin MM, Walsh JR, Gokhale PJ, Draper JS, Bahrami AR, Morton I, Moore HD, ... SHH, Katherine G. Hamil, Gail Grossman, Peter Petrusz and Frank S. French (2002).
Md Shakir Hussain Haider, Wajihul Hasan Khan, Farah Deeba, Sher Ali, Anwar Ahmed, Irshad H Naqvi, Ravins Dohare,. Hytham A. Alsenaidy, Abdulrahman M.
Error bars indicate SD measured in at least three independent sporulation experiments. The analyses described employed the SterneâhtrA IIBR-BA104KR clone ...
Supplementary Table S1. Sub-set of genes found to be differently transcribed (above or below 1.5-fold) in IST439 and IST4113. CDS/Gene
mRNA IST4113 mRNA IST439
Function
Carbohydrate metabolism Electron transport and oxidative phosphorylation BCAL0030/atpB F0F1 ATP synthase subunit A BCAL0037/atpC F0F1 ATP synthase subunit epsilon BCAM2674 Putative cytochrome oxidase subunit I BCAM2675 Putative cytochrome oxidase subunit II Ubiquinol-cytochrome c reductase iron-sulfur subunit; BCAL0328/petA involved in aerobic respiration Cytochrome b of the cytochrome bc complex; BCAL0329/petB involved in aerobic respiration BCAL0330/petC Cytochrome c1 precursor BCAL0388 Ubiquinone biosynthesis hydroxylase family protein Cytochrome d ubiquinol oxidase subunit II BCAL0784/cydA (cytochrome bd) Cytochrome d ubiquinol oxidase subunit II BCAL0785/cydB (cytochrome bd) BCAL2141/cyoD Cytochrome o ubiquinol oxidase BCAL2142/cyoC Cytochrome o ubiquinol oxidase subunit III BCAL2143/cyoB Ubiquinol oxidase polypeptide I BCAL2144/cyoA Ubiquinol oxidase polypeptide II precursor Glyoxylate cycle BCAL2122/aceB BCAM1588
Transport Sulphur-based compounds Periplasmic component of the ABC taurine transporter BCAL0711/tauA TauABC ATPase componenent of the ABC taurine transporter BCAL0712/tauB TauABC Permease component of taurine ABC transporter BCAL0713/tauC TauABC Permease component of the ABC transporter SsuABC BCAL1620/ssuC required for uptake of aliphatic sulfonates ATPase component of of the ABC transporter BCAL1621/ssuB SsuABC required for uptake of aliphatic sulfonates Sugars BCAL1377 BCAL1431 BCAL0781 BCAL1092 BCAM0153/kgdT BCAM2509 BCAM1986 BCAM2545 BCAM2697 BCAS0122 BCAS0343 BCAS0438
H+/citrate symporter Putative outer membrane component of an ABC transport system required for ribose uptake Phosphotransferase system IIC components; specific for glucose/maltose/N-acetylglucosamine Periplasmic component of a ABC transporter similar to a 2-aminoethylphosphonate transport system 2-keto-3-deoxygluconate permease Putative fucose transporter Putative sugar transporter of the Major Facilitator Superfamily Putative sugar transporter of the Major Facilitator Superfamily Putative sugar transporter of the Major Facilitator Superfamily Putative sugar transporter of the Major Facilitator Superfamily Putative sugar transporter of the Major Facilitator Superfamily Predicted periplamic component of an ABC sugar transporter
Amino acids and peptides BCAM0978/lysP Lysine-specific permease Predicted periplasmic component of a putative BCAL1668 arginine/ornithine/lysine ABC transporter Putative branched-chain amino acid transport system BCAL0766 permease protein BCAL1252 Putative proline/betaine transporter Putative amino acid permease predicted to be involved BCAL2729 in uptake of GABA ATPase component of a leucine/isoleucine/valine BCAM2248/livG amino acid ABC transporter
Function Permease component of a leucine/isoleucine/valine amino acid ABC transporter Periplasmic component of a putative arginine/ornithine/lysine ABC transporter ATPase component of Putative oligopeptide ABC transporter ATPase component of Putative oligopeptide ABC transporter Permease component of Putative oligopeptide ABC transporter Predicted periplasmic component of a putative arginine/ornithine/lysine ABC transporter
Cell envelope and outer membrane LPS and peptidoglycan biosynthesis 3-deoxy-8-phosphooctulonate synthase presumed to be involved in synthesis of 3-deoxy-D-mannoBCAL2180 octulosonic acid; required for LPS biosynthesis Putative phosphosugar-binding protein presumed to be BCAL0779 involved in peptidoglycan synthesis Tetraacyldisaccharide-1-P-kinase involved in lipid A BCAL2759 biosynthesis Putative glycosyltransferase presumed to be involved BCAM0214 in LPS biosynthesis Putative outer membrane protein presumed to be involved in the secretion of peptidoglycan-associated BCAM0220 (lipo)proteins BCAL0067 ADP-heptose:LPS heptosyltransferase D-alanyl-D-alanine endopeptidase (penicillin-binding BCAL2205 protein precursor) 3-deoxy-D-manno-octulosonic-acid transferase BCAL3110/waaA involved in biosynthesis of O-antigen Protein of unknown function that is involved in BCAL3111/wbxY biosynthesis of O-antigen Putative undecaprenyl pyrophosphate synthetase BCAM2067/uppS involved in peptidoglycan biosynthesis
mRNA IST4113 mRNA IST439 1.9 1.9 1.8 2.0 1.7 1.6
1.5 3.4 2.3 2.9 2.3 -1.6 -1.6 -1.6 -1.6 -3.7
Protein secretion BCAL1671 BCAM0180 BCAL2466/eco BCAL2867/lepA BCAM0550
Metallo peptidase Metallo peptidase Serine-protease inhibitor ecotin GTP-binding protein that functions as an exoprotease Putative exported lipase
2.5 3.3 1.8 1.5 1.9
Adhesion BCAM0184/bclB
Lectin; required for attachment to mucin
1.7
CDS/Gene BCAM0185/bclC
Function
mRNA IST4113 mRNA IST439
BCAM0223 BCAL1086/bclA BCAM0224
Lectin; required for attachment to mucin Putative haemagglutinin-related autotransporter protein Putative haemagglutinin-related autotransporter protein Lectin; required for attachment to mucin Putative haemagglutinin autotransporter protein
Structural component of the ribosome 50S ribosomal protein L11 50S ribosomal protein L10 50S ribosomal protein L7/L12 30S ribosomal protein S12 30S ribosomal protein S12 30s ribosomal protein S10 50S ribosomal protein L3 50S ribosomal protein L4 50S ribosomal protein L23 50S ribosomal protein L2 30S ribosomal protein S19 50S ribosomal protein L22 30S ribosomal protein S3 50S ribosomal protein L16 50S ribosomal protein L29 30S ribosomal protein S17 50S ribosomal protein L14 50S ribosomal protein L24 50S ribosomal protein L5 30S ribosomal protein S14 30S ribosomal protein S8 50S ribosomal protein L6 50S ribosomal protein L18 30S ribosomal protein S5 50S ribosomal protein L30 50S ribosomal protein L15 50S ribosomal protein L36 30S ribosomal protein S13 30S ribosomal protein S11 30S ribosomal protein S4 50S ribosomal protein L17 50S ribosomal protein L25/general stress protein Ctc 50S ribosomal protein L32 50S ribosomal protein L35 50S ribosomal protein L20 50S ribosomal protein L31 type B 50S ribosomal protein L9
30S ribosomal protein S18 30S ribosomal protein S6 50S ribosomal protein L33 30S ribosomal protein S20 30S ribosomal protein S16 30S ribosomal protein S1 30S ribosomal protein S9 50S ribosomal protein L13 50S ribosomal protein L21 Elongation factor Tu Elongation factor G Elongation factor Tu Elongation factor P Translation initiation factor IF-1 Translation initiation factor IF-2
Ion homeostasis Iron assimilation BCAL1697/orbJ BCAL1698/orbK BCAL1699/pvdA BCAL1700/orbA BCAL1701/orbF BCAL1702/orbL BCAM2626/huvA BCAM2627/hmuS BCAM0564 BCAL1371 BCAM1571 BCAM2227/phcG BCAM2230/phcE
Non-ribosomal peptide synthase required for ornibactin biosynthesis Protein of unknown function involved in ornibactin biosynthesis L-ornithine-oxygenase involved in ornibactin biosynthesis Ornibactin receptor; presumably involved in the transport of iron-ornibactin complexes Ornibactin synthetase Protein of unknown function involved in ornibactin biosynthesis Putative heme receptor protein Putative hemin ABC transport system protein TonB-dependent receptor TonB-dependent receptor TonB-dependent receptor Putative pyochelin biosynthetic protein Dihydroaeruginoic acid synthetase PchE involved in pyochelin biosynthesis
