Useful Abbreviations Nucleotide abbreviations Genetic Code

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AUU Ile I ACU Thr T AAU Asn N AGU Ser S. AUC Ile I ACC Thr T AAC Asn N AGC Ser S. AUA Ile I ACA Thr T AAA Lys K AGA Arg R. AUG Met M ACG Thr T AAG ...
Useful Abbreviations Nucleotide abbreviations Base Meaning A A C C G G T T U T M A or C R A or G W A or T S C or G Y C or T K G or T V A or C H A or C D A or G B C or G X A or C N A or C . not A,

Complement T G C A A (aMino) K (puRine) Y (Weak, 2 H-bonds) W (Strong, 3 H-bonds) S (pYrimidine) R (Keto) M or G (not T; V > T) B or T (not G; H > G) D or T (not C; D > C) H or T (not A; B > A) V or G or T X or G or T (aNy) N C, G, or T .

Genetic Code UUU UUC UUA UUG

Phe Phe Leu Leu

F F L L

UCU UCC UCA UCG

Ser Ser Ser Ser

S S S S

UAU UAC UAA UAG

Tyr Tyr STOP STOP

Y Y * *

UGU UGC UGA UGG

Cys Cys STOP Trp

C C * W

CUU CUC CUA CUG

Leu Leu Leu Leu

L L L L

CCU CCC CCA CCG

Pro Pro Pro Pro

P P P P

CAU CAC CAA CAG

His His Gln Gln

H H Q Q

CGU CGC CGA CGC

Arg Arg Arg Arg

R R R R

AUU AUC AUA AUG

Ile Ile Ile Met

I I I M

ACU ACC ACA ACG

Thr Thr Thr Thr

T T T T

AAU AAC AAA AAG

Asn Asn Lys Lys

N N K K

AGU AGC AGA AGG

Ser Ser Arg Arg

S S R R

GUU GUC GUA GUG

Val Val Val Val

V V V V

GCU GCC GCA GCG

Ala Ala Ala Ala

A A A A

GAU GAC GAA GAG

Asp Asp Glu Glu

D D E E

GGU GGC GGA GGG

Gly Gly Gly Gly

G G G G

1-letter AA identifiers and their 3-letter abbreviations A C D E F

Ala Cys Asp Glu Phe

G H I K L

Gly His Ile Lys Leu

M N P Q

Met Asn Pro Gln

R S T V

Programs for filtering sequences - p.6 of 6

Arg Ser Thr Val

W Trp Y Tyr X (any) * (end)