Gupta PK, Rustgi S, Mir RR (2013) Array-based high-throughput dna markers
and genotyping platforms for cereal genetics and genomics. In: P.K Gupta and
R.K.
Summary of published/submitted papers Total citations received so far = >450 H-index = 11 The citations (whenever available) are given below each publication
(A) Published papers (year-wise)
Year 2013 1. Mir RR, Saxena RK, Saxena KB, Upadhyaya HD, Kilian A, Cook DR, Varshney RK (2013) Whole-Genome Scanning for Mapping Determinacy in Pigeonpea (Cajanus spp.). Plant Breeding doi:10.1111/j.1439-0523.2012.02009.x (Impact factor = 1.596) [First report of association mapping for any trait in pigeonpea] 2. Agarwal P, Kumar S, Mir RR, Balyan HS and Gupta PK (2013) Some ENU induced mutation: a resource for functional genomics in bread wheat. Plant Mutation Reports 3:9-17 3. Mir RR, and Varshney RK (2013) Future prospects of molecular markers in plants. In: Robert J. Henry (eds.), Molecular Markers in Plants. Blackwell Publishing Ltd, Oxford, UK. , pp. 169-190. ISBN 9781118473023 4.
Mir RR, Hiremath PJ, Riera-Lizarazu O, Varshney RK (2013) Evolving molecular marker technologies in plants: From RFLPs to GBS. In: T. Lübberstedt and R.K. Varshney (eds.), Diagnostics in Plant Breeding. Springer Science+Business, New York, pp. 229-247. ISBN 978-94-007-5686-1 ;978-94-007-5687-8
5. Mir RR and Kulwal PL (2012) Legume genetics and genomics: recent advances. Science Academy Newsletters. (in press)
6. Gupta PK, Rustgi S, Mir RR (2013) Array-based high-throughput dna markers and genotyping platforms for cereal genetics and genomics. In: P.K Gupta and R.K Varshney (eds.), Cereal Genomics II, Springer, The Netherlands DOI: 10.1007/97894-007-6401-9_2 7. Gupta PK, Kulwal PL, Mir RR (2013) QTL Mapping: Methodology and Applications in Cereal Breeding. In: P.K Gupta and R.K Varshney (eds.), Cereal Genomics II, Springer, The Netherlands, DOI: 10.1007/978-94-007-6401-9_11 8. Jain S, McPhee K, Kumar A, Mir RR, Singh R (2013) Virus Resistance Breeding in Cool Season Food Legumes: Integrating Traditional and Molecular Approaches. In: G.S. Bhullar and N. K. Bhullar (eds.) Agricultural Sustainability, Progress and Prospects in Crop Research. Elsevier Academic Press, pp221-239
9. Mir RR, Bhat JA, Jan N, Singh B, Razdan AK, Bhat MA, Kumar A, Pratap A, Kumar J (2013) Alien genes from the wild and molecular markers for crop improvement. In: A Pratap and J Kumar (eds.), Alien Gene Transfer in Crop Plants: Innovations, Methods and Risk Assessment (Volume 1). Springer, New York, USA
Year 2012 10. Mir R.R, Kumar N, Jaiswal V, Girdharwal N, Prasad M, Balyan H.S, Gupta P.K (2012) Genetic dissection of grain weight (GW) in bread wheat through QTL interval and association mapping. Molecular Breeding 29:963-972 (Cited= 1, Impact factor = 2.852; 5 years impact factor =2.43) [First report where two approaches of genetic dissection have been used together for validation/fine mapping of more than 10 QTLs]
11. Jaiswal V, Mir RR, Mohan A, Balyan H.S, Gupta PK (2012) Association mapping for pre-harvest sprouting tolerance in bread wheat (Triticum aestivum L.). Euphytica DOI 10.1007/s10681-012-0713-1 (Impact factor =1.554) [First report of association mapping for PHST in India]
12. Mir RR, Zaman-Allah M, Sreenivasulu N, Trethowan R, Varshney RK (2012) Integrated genomics, physiology and breeding approaches for improving drought tolerance in crops. Theoretical and Applied Genetics 125:625-645 Cited= 2 (impact factor = 3.814) Most downloaded article in the history of TAG journal 13. Ahmad N, Mir JI, Mir RR, Rather N, Rashid R, Wani SH, Shafi W, Mir H, Shiekh MA (2012) SSR and RAPD analysis of genetic diversity in walnut (Juglans regia L.) genotypes from Jammu and Kashmir, India. Physiol Mol Biol Plants DOI 10.1007/s12298-012-0104-z Impact factor = 0.56 14. Banerjee S, Das S, Mir RR, Kundu A, Topdar N, Sarkar D, Sinha MK, Balyan HS, Gupta PK (2012) Assessment of Genetic Diversity and Population Structure in a Selected Germplasm Collection of 292 Jute Genotypes by Microsatellite (SSR) Markers. Molecular Plant Breeding 3:11-25 [First report of association mapping for any trait in jute]
15. Mir RR, Thudi M, Chamarthi SK, Krishnamurthy L, Gaur PM, Varshney RK (2012) Translational root genomics for crop improvement. In: Martin Crespi (eds.), Roots and their soil interactions: What we can learn from genomics. John Wiley & Sons, Inc., USA, pp. 249-264. ISBN 9781118447093. 16. Das M, Banerjee S, Dhariwal R, Mir RR, Vyas S, Topdar N, Kundu A, Khurana JP, Tyagi AK, Sarkar D, Sinha MK, Balyan HS, Gupta PK (2012). Development of SSR markers and construction of a first generation linkage map in jute. J Genetics 91: 2131
Impact factor =1.086
[First report of utility of SSR markers for construction of linkage map in Jute] 17. Mir R.R, Kumar J, Balyan H.S and Gupta P.K (2012). A study of genetic diversity among Indian bread wheat (Triticum aestivum L.) cultivars released during last 100 years. Genetic Resources and Crop Evolution 59:717-726 (Cited= 1, Impact factor =1.554) [Comprehensive analysis of genetic diversity in cultivated bread wheat cultivars in India]
Year 2011 18. Das M, Banerjee S, Topdar N, Kundu A, Mir RR, Sarkar D, Sinha MK, Balyan HS, Gupta PK (2011). QTL identification for molecular breeding of fibre yield and fibre quality traits in jute. Euphytica DOI 10.1007/s10681-011-0603-y (Impact factor =1.554) [First report of QTL mapping in Jute] 19. Kumar J, Kumar N, Kumar A, Mir R.R, Kumar S, Kumar R, Jaiswal V, Tyagi S, Prabhu K.V, Balyan H.S and Gupta P.K. (2011). Introgression of a major gene for high grain protein content in some Indian bread wheat cultivars. Filed Crops Research Doi:10.1016/j.fcr.2011.05.013 (Impact factor = 2.936) [Successful report of marker-assisted selection (MAS) for grain protein content in bread wheat from India] 20. K. Ravi, V. Vadez, S. Isobe, R.R. Mir, Y. Guo, S.N. Nigam, M.V.C. Gowda, T. Radhakrishnan, D.J. Bertioli, S.J. Knapp, R.K. Varshney (2011) Identification of several small main-effect QTLs and a large number of epistatic QTLs for drought tolerance in groundnut (Arachis hypogaea L.). Theor Applied Genet DOI 10.1007/s00122-010-1517-0 (Citations=11; Impact factor = 3.814; 5 years impact factor = 3.96) 21. Mir R.R*, Kulwal P.L*, Kumar S and Gupta P.K (2011) QTL Analysis and Molecular Breeding for Seed Dormancy and Pre-harvest Sprouting Tolerance in Bread Wheat. J. Plant Biol 37: 1–16 (*equal contribution) 22. Gupta PK, Balyan HS, Mir RR, Kumar J, Kumar A, Kumar S, JaiswaV, Tyagi S, Kumari S (2011) QTL analysis, association mapping and marker-assisted selection for some quality traits in bread wheat - An overview of the work lone at CCS University, Meerut. J. Wheat Res. 3: 1-11 23. Husaini A.M, Rashid Z, Mir R.R and Aquil B (2011). Approaches for gene targeting and targeted gene expression in plants. GM Crops Doi.org/10.4161/gmcr.2.3.18605 (Vol 2:3, June-Dec Issue)
24. Burstin J, Gallardo K, Mir R. R, Varshney R.K and Duc G. (2011). Improving protein content and nutrition quality in legumes. In: Pratap, A. and Kumar, J. (eds.),
Biology and Breeding of Food Legumes. CAB International, Wallingford, UK, pp. 314-328. ISBN 9781845937669 25. Mir RR (2011) Structural analysis and association mapping in crop plants. In: Lecture Notes of 15th Hands on Training Course on Molecular Methods for Conservation, Characterization and Utilization of Genetic Diversity, CCMB, Hyderabad (India), Feb 26- March 12, 2011 Year 2010 26. Kumar J, Mir R.R, Kumar N, Kumar A, Mohan A, Prabhu K.V, Balyan H.S and Gupta P.K. (2010) Marker assisted selection for pre-harvest sprouting tolerance and leaf rust resistance in bread wheat. Plant Breeding 129: 617-621 (Citation = 5; 2008 impact factor = 1.396; 5 years impact factor = 1.36) [Successful report of marker-assisted selection for pre-harvest sprouting tolerance in bread wheat ] 27. Gupta P.K. Langridge P. and Mir R.R (2010). Marker-Assisted Wheat Breeding: Present Status and Future Possibilities. Molecular Breeding 26:145–161 (Citation = 13; 2008 impact factor = 2.852; 5 years impact factor =2.43) Fourth most downloaded article in the history of Mol. Breeding journal 28. Gupta P.K, Kumar J, Mir R.R and Kumar A. (2010). Marker-assisted selection as a component of conventional plant breeding. Plant Breeding Reviews 33:145-217 (Citation = 8)
29. Gupta P.K, Balyan H.S, Kumar J, Mohan A, Kumar A, Mir R.R, Kumar S, Kumar R, Jaiswal V, Tyagi S, Agarwal P, Gahlaut V, Das M, and Banerjee S (2010). Deployment of Molecular Markers for the Improvement of Some Important Quality Traits in Bread Wheat. Ann. Wheat Newslett. 56: 60-65
Year 2009 30. Mir R.R, Banerjee S, Das M, Gupta V, Tyagi A.K, Sinha M.K, Balyan H.S and Gupta P.K. (2009). Development and Characterization of Large-Scale SSRs in Jute. Crop Science 49: 1687-1694. (Citations = 10; 2008 impact factor = 1.641; 5 years impact factor = 1.910)
[This is the first report of development of large scale (>1000) SSR markers in jute] 31. Mohan A, Kulwal P.L, Singh R, Kumar V, Mir R.R, Kumar J, Prasad M, Balyan H.S. and Gupta P.K. (2009). Genome wide QTL analysis for pre-harvest sprouting tolerance in bread wheat. Euphytica 168: 319–329 (Citations = 12; 2008 Impact factor = 1.554; 5 years impact factor = 1.62) [Sucessful construction of frame-work linkage map for PHST in bread wheat] 32. Gupta P.K, Balyan H.S, Kumar J, Mohan A, Kumar A, Mir R.R, Kumar S, Kumar R, Kumari P, Bhalla A, Jaiswal V, Das M, and Banerjee S (2009). Development and use of molecular markers for wheat genomics and breeding. Ann. Wheat Newslett. 55: 66-71
Year 2008 33. Gupta P.K, Rustgi S and Mir R.R (2008) Array-based high-throughput DNA markers for crop improvement. Heredity 101: 5-18 (Published by Nature Publishers) (Citations = 76; 2008 Impact factor = 4.569; 5 years impact factor = 3.62) 34. Mir R.R, Rustgi S, Sharma S, Singh R, Goyal A, Kumar J, Gaur A, Tyagi A.K, Khan H, Sinha M.K, Balyan H.S and Gupta P.K. (2008a) A preliminary genetic analysis of fibre traits and the use of new genomic SSRs for genetic diversity in jute. Euphytica 161: 413–427 (Citations = 18; 2008 Impact factor = 1.554; 5 years impact factor = 1.62) [This is the first report of development of genomic SSRs in jute] 35. Gupta P.K, Mir R.R, Mohan A and Kumar J. (2008) Wheat genomics: Present status and future prospectus. Special issue on Genomics of Major Crops and Model Plant Species. Internationl Journal of Plant Genomics doi:10.1155/2008/896451. (Hindawi Publishing Corporation USA) (Citations = 36) 36. Gupta P.K, Balyan H.S and Mir R.R (2008). Wheat Genetics in the Post-Genomics Era. Current Science 95: 1660-1662. (2008 Impact factor = 0.935; 5 years impact factor = 0.98) 37. Gupta P.K, Balyan H.S, Kumar J, Mohan A, Goyal A, Kumar A, Mir R.R, Kumar S, Kumar R, Banerjee S, Das M (2008). Development and use of molecular markers for wheat genomics and breeding. Ann. Wheat Newslett. 54: 59-63 38. Banerjee S, Mir R.R, Das M, Gupta V, Tyagi A.K, Sinha M.K, Balyan H.S and Gupta P.K (2008). Large Scale Development of SSRs and their Use for Detection of Polymorphism in Jute. Proceedings of International Symposium on Jute and Allied Fibres Production, Utilization and Marketing, Kolkata, India 39. Das M, Banerjee S, Mir R.R, Sinha M.K, Balyan H.S and Gupta P.K (2008) AFLP Analysis for Detection of Polymorphism in Jute. Proceedings of International Symposium on Jute and Allied Fibres Production, Utilization and Marketing, Kolkata, India (Citations = 2) 40. Balyan H.S, Gupta PK, Mir R.R and Kumar J (2008). Genetic diversity and population structure analysis among Indian bread wheat cultivars. Proceedings of 11th International wheat genetics symposium (IWGS), August 24-29, 2008, Brisbane Australia 41. Mir R.R, Kumar N, Prasad M, Girdharwal N, Kumar J, Balyan H.S and Gupta P.K (2008b). Single-locus and two-locus QTL analysis to detect main effect and epistatic QTL for grain weight in bread wheat. Proceedings of 11th International wheat genetics symposium (IWGS), August 24-29, 2008, Brisbane Australia. 42. Gupta P.K, Balyan H.S, Kumar J, Kulwal P.L, Kumar N, Mir R.R, Kumar A and Prabhu KV (2008). QTL analysis and marker assisted selection in bread wheat.
Proceedings of 11th International wheat genetics symposium (IWGS), August 24-29, 2008, Brisbane Australia. (Citations = 2) Year 2007 43. Gupta P.K, Balyan H.S, Kulwal P.L, Kumar N, Kumar A, Mir R.R, Mohan A and Kumar J. (2007) QTL analysis for some quantitative traits in bread wheat. Journal. Zhejiang University Science-B 8: 807-814 (Co-published with Springer) (Citations = 4; 2008 Impact factor = 1.099; 5 years impact factor = 2.74) Year 2006 44. Gaurav S.S, Mir R.R and Singh Y.P (2006). Effect of plant growth regulators on growth yield and sex expression on bottle gourd var. Aishwarya. Progressive Agriculture 6: 11-4 45. Gupta P.K, Balyan H.S, Bandopadhyay R, Kumar J, Mohan A, Kumar N, Kulwal P.L, Rustgi S, Singh R, Goyal A, Kumar A, Kumar V, Girdharwal N, Mir R.R (2006). Development and use of molecular markers for wheat genomics and breeding. Ann. Wheat Newslett. 52: 43-47
